Function reference • epiphytoolR

All functions

Audpc(): Calculate area under the disease progress curve

DIV(): Daily Infection Values

DIV_Tm_index(): Daily Infection Value - temperature index

calc_estimated_weather(): Calculate estimated weather from coefficients

calc_fpea_emergence(): Calculate field-pea emergence

calc_svp(): Calculate saturated Vapour-pressure

calc_vp(): Calculate Vapour-pressure

calc_vpd(): Calculate Vapour-pressure deficit from relative humidity and temperature

check_weather_warnings(): Check format_weather warnings

circular_influence(): Calculate the influence of 2 dimensional vectors

create_inf_xyz(): Create xyz data.frame with z plots

disease_aug_soil(): DiseaseAUGSoil - number of girdled internodes

est_primary_inoculum(): Estimate blackspot primary inoculum

exp_dk(): Exponential dispersal kernel

fill_time_gaps(): Fill time gaps in data.frame

format_weather(): Format weather data into a standardised format.

get_bom_observations(): Download state weather observations

get_weather_coefs(): Calculate weather coefficients

impute_diurnal(): Impute hourly diurnal weather fluctuations.

impute_fill(): Fill Imputation

impute_rh(): Impute Relative Humidity

impute_temp(): Impute Temperatures

make_bom_data(): Mock Bureau of Meteorology weather data

merge_axf_weather(): Merge BOM axf weather data

multi_var_binom(): Splash dispersal multi-binomial in a pixel

power_dk(): Power law dispersal kernal

weather: Simulated weather data

wind_angle(): Estimates Bearing Conidia Dispersed by Wind Driven Rain

wind_distance(): Estimate the distance of spore dispersal from wind speed